Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.44□□□□□ -1.22
Upk3aQ9JKX8 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm43023-201ENSMUST00000197583 2106 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm44104-201ENSMUST00000204736 3777 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm15763-201ENSMUST00000120136 403 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm15049-201ENSMUST00000120474 463 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm23117-201ENSMUST00000158482 108 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm9423-201ENSMUST00000183173 997 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm27595-201ENSMUST00000184579 112 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm28239-201ENSMUST00000190225 447 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm38078-201ENSMUST00000192771 392 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm43013-201ENSMUST00000198216 247 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm43542-201ENSMUST00000199505 379 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Upk3aQ9JKX8 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Mir763-201ENSMUST00000103249 120 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm12124-201ENSMUST00000120504 679 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm13622-201ENSMUST00000120658 433 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm11954-201ENSMUST00000121403 349 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Mir1231-201ENSMUST00000175639 81 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm18349-201ENSMUST00000187440 904 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm29195-201ENSMUST00000189038 379 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm38203-201ENSMUST00000191815 245 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm38254-201ENSMUST00000192276 1009 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm42723-201ENSMUST00000199966 1044 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm7542-201ENSMUST00000201140 777 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm31579-201ENSMUST00000203306 966 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm40853-201ENSMUST00000221342 582 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm9255-201ENSMUST00000223225 581 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 AC118249.1-201ENSMUST00000224822 608 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm9801-201ENSMUST00000054860 408 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms