Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Ighv3-8-201ENSMUST00000103483 394 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Pla2g2d-202ENSMUST00000105806 1206 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm14283-201ENSMUST00000119763 325 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 2210408F21Rik-205ENSMUST00000138606 482 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Dlx1as-203ENSMUST00000140271 700 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm24786-201ENSMUST00000157379 109 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm22587-201ENSMUST00000157511 298 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm24498-201ENSMUST00000158445 102 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm23387-201ENSMUST00000158586 107 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 B230216N24Rik-201ENSMUST00000159324 1140 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm9169-201ENSMUST00000182930 536 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm37716-201ENSMUST00000193553 947 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Rps7-ps1-201ENSMUST00000211928 391 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm20946-201ENSMUST00000212367 461 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC183268.3-201ENSMUST00000215015 282 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC154264.2-201ENSMUST00000216569 403 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC161424.1-201ENSMUST00000216969 666 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC158531.1-201ENSMUST00000224617 457 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC123692.2-201ENSMUST00000226272 342 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC125523.1-201ENSMUST00000228018 934 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC154528.1-201ENSMUST00000228584 527 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm5292-201ENSMUST00000073317 580 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm22287-201ENSMUST00000083197 107 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Ccdc28a-201ENSMUST00000052648 2255 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm26965-201ENSMUST00000167914 1520 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm44874-201ENSMUST00000206586 1542 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Tnip3-207ENSMUST00000212375 1543 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm5134-201ENSMUST00000099577 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC160637.1-201ENSMUST00000214037 3887 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Vmn2r53-201ENSMUST00000170412 2421 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Eif2b3-202ENSMUST00000106447 3754 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 4930511A02Rik-201ENSMUST00000181268 1935 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Trim39Q9ESN2 AC160340.1-201ENSMUST00000222952 3964 ntBASIC7.96□□□□□ -1.13
Trim39Q9ESN2 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Rpl7l1-ps1-201ENSMUST00000118822 725 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm23385-201ENSMUST00000158592 295 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm15740-201ENSMUST00000159703 1292 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm17038-201ENSMUST00000166586 494 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm9637-201ENSMUST00000179141 873 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Mir7655-201ENSMUST00000183376 58 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm27927-201ENSMUST00000183791 126 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm27483-201ENSMUST00000184983 71 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm29444-201ENSMUST00000187152 1156 ntTSL 5 BASIC7.96□□□□□ -1.14
Trim39Q9ESN2 Gm9322-201ENSMUST00000188144 958 ntBASIC7.96□□□□□ -1.14
Trim39Q9ESN2 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms