Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm18848-201ENSMUST00000182069 792 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 AC153932.1-201ENSMUST00000218558 787 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm40853-201ENSMUST00000221342 582 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm9255-201ENSMUST00000223225 581 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 CT030705.2-201ENSMUST00000225301 556 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm26264-201ENSMUST00000083278 159 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Sltm-201ENSMUST00000049263 3691 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm43158-201ENSMUST00000198484 1555 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 AC122397.1-201ENSMUST00000228650 2819 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm43589-201ENSMUST00000199400 1523 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm14248-201ENSMUST00000117790 544 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm15778-201ENSMUST00000118469 608 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm5135-201ENSMUST00000121100 573 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm7599-201ENSMUST00000121453 796 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm14200-201ENSMUST00000122256 192 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm23776-201ENSMUST00000158993 325 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm2976-201ENSMUST00000160362 513 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm3489-201ENSMUST00000190083 528 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm18043-201ENSMUST00000216741 739 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 AC125543.2-201ENSMUST00000222114 105 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm9280-201ENSMUST00000223155 517 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 CT030170.7-201ENSMUST00000223372 103 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 AC133598.3-204ENSMUST00000224260 767 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 AC115357.1-201ENSMUST00000227575 466 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 AC102676.1-201ENSMUST00000228131 719 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 AC131033.1-201ENSMUST00000228223 279 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm6887-201ENSMUST00000080945 482 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm25189-201ENSMUST00000083911 164 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm43686-201ENSMUST00000197351 2439 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm44249-201ENSMUST00000204538 1805 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Gm38336-201ENSMUST00000193040 2549 ntBASIC9.84□□□□□ -0.83
RtcbQ99LF4 Bank1-205ENSMUST00000198206 2538 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
RtcbQ99LF4 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.84
RtcbQ99LF4 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
RtcbQ99LF4 Kif18b-201ENSMUST00000021311 3326 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 258.1 ms