Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm26436-201ENSMUST00000180325 132 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm46317-201ENSMUST00000221103 393 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 AC139323.1-201ENSMUST00000223370 1040 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 AC163660.3-202ENSMUST00000224917 464 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 AC165155.1-201ENSMUST00000228932 445 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm43623-201ENSMUST00000199289 2663 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm28906-201ENSMUST00000191371 1779 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm22934-201ENSMUST00000103961 132 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Mir467f-201ENSMUST00000116923 120 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm8802-201ENSMUST00000118633 740 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm15047-201ENSMUST00000118891 454 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm13622-201ENSMUST00000120658 433 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm13495-201ENSMUST00000121156 537 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm23187-201ENSMUST00000175746 86 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm43008-201ENSMUST00000202346 286 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm19172-201ENSMUST00000203170 1246 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm32842-201ENSMUST00000212653 738 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 AL645704.1-201ENSMUST00000221642 604 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 AC107663.2-201ENSMUST00000225534 1234 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 AC116487.1-201ENSMUST00000227033 339 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Gm15575-201ENSMUST00000119414 1581 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 AC124675.1-201ENSMUST00000226263 1390 ntBASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cchcr1Q8K2I2 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm44550-201ENSMUST00000207311 2058 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm15355-201ENSMUST00000118929 285 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cchcr1Q8K2I2 Gm27675-201ENSMUST00000184527 94 ntBASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms