Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp54Q8BL06 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp54Q8BL06 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Usp54Q8BL06 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Usp54Q8BL06 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC10.85□□□□□ -0.67
Usp54Q8BL06 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm8421-201ENSMUST00000119439 305 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm16113-201ENSMUST00000159629 372 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm8305-201ENSMUST00000180022 1195 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm26784-201ENSMUST00000181666 410 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm28070-201ENSMUST00000191502 445 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm44279-201ENSMUST00000205154 472 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 AC124489.1-201ENSMUST00000225852 526 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 AC159205.7-201ENSMUST00000225988 692 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm18830-201ENSMUST00000199036 1396 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm42648-201ENSMUST00000200774 2505 ntBASIC10.84□□□□□ -0.67
Usp54Q8BL06 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usp54Q8BL06 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Usp54Q8BL06 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm15007-201ENSMUST00000119982 710 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm25505-201ENSMUST00000157220 246 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm5272-201ENSMUST00000182730 982 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Mir8105-201ENSMUST00000184718 89 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm5261-201ENSMUST00000185860 713 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm19238-201ENSMUST00000221936 1260 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm9267-201ENSMUST00000222831 404 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm36938-201ENSMUST00000191612 2696 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm45354-201ENSMUST00000199820 2557 ntBASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Usp54Q8BL06 Gm22781-201ENSMUST00000104083 137 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm12593-201ENSMUST00000120981 743 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm27014-201ENSMUST00000182658 937 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Mir6241-201ENSMUST00000184225 103 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm37920-201ENSMUST00000192952 749 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC10.82□□□□□ -0.68
Usp54Q8BL06 AV026068-219ENSMUST00000224148 933 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 n-R5s60-201ENSMUST00000083299 119 ntBASIC10.82□□□□□ -0.68
Usp54Q8BL06 Gm23734-201ENSMUST00000083753 109 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms