Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Gm45182-201ENSMUST00000207579 2404 ntBASIC7.51□□□□□ -1.21
ClpbQ60649 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 AC158686.1-201ENSMUST00000218068 2332 ntBASIC7.51□□□□□ -1.21
ClpbQ60649 Gm4451-201ENSMUST00000186000 1891 ntBASIC7.51□□□□□ -1.21
ClpbQ60649 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
ClpbQ60649 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC7.51□□□□□ -1.21
ClpbQ60649 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.51□□□□□ -1.21
ClpbQ60649 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
ClpbQ60649 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ClpbQ60649 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Phf7-206ENSMUST00000228437 1373 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 AC162467.2-201ENSMUST00000219397 2571 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 n-R5s1-201ENSMUST00000101925 119 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.5□□□□□ -1.21
ClpbQ60649 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm8688-201ENSMUST00000118240 969 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Gm13252-201ENSMUST00000119355 321 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Gm12123-201ENSMUST00000120348 472 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Gm11585-201ENSMUST00000120901 569 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Gm25845-201ENSMUST00000122588 310 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm17530-201ENSMUST00000194336 472 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm45283-201ENSMUST00000210593 628 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm5948-201ENSMUST00000219627 839 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Gm21321-201ENSMUST00000220179 446 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.5□□□□□ -1.21
ClpbQ60649 AC155266.1-201ENSMUST00000220762 904 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 AC092710.1-201ENSMUST00000221005 192 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 AC126028.1-201ENSMUST00000226218 2123 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm24143-201ENSMUST00000082633 145 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ClpbQ60649 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.5□□□□□ -1.21
ClpbQ60649 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ClpbQ60649 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.5□□□□□ -1.21
ClpbQ60649 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC7.49□□□□□ -1.21
ClpbQ60649 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
ClpbQ60649 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC7.49□□□□□ -1.21
ClpbQ60649 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.49□□□□□ -1.21
ClpbQ60649 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ClpbQ60649 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ClpbQ60649 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
ClpbQ60649 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ClpbQ60649 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ClpbQ60649 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ClpbQ60649 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
ClpbQ60649 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
ClpbQ60649 Gm23946-201ENSMUST00000104423 197 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
ClpbQ60649 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.49□□□□□ -1.21
ClpbQ60649 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 Gm12460-201ENSMUST00000117147 357 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 Gm12098-201ENSMUST00000118277 508 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC7.49□□□□□ -1.21
ClpbQ60649 Gm12773-201ENSMUST00000120134 587 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 Gm13726-201ENSMUST00000121278 794 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
ClpbQ60649 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.49□□□□□ -1.21
ClpbQ60649 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ClpbQ60649 Gm10182-201ENSMUST00000178676 273 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms