Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 AC156025.3-201ENSMUST00000225919 3095 ntBASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Gm42907-201ENSMUST00000199793 2148 ntBASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Vps54Q5SPW0 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm22660-201ENSMUST00000104193 130 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm15047-201ENSMUST00000118891 454 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm12955-201ENSMUST00000119689 957 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Mir7011-201ENSMUST00000183768 73 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm37481-201ENSMUST00000195176 403 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Mif-ps7-201ENSMUST00000223357 327 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 AC157650.2-201ENSMUST00000224666 328 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 AC165154.2-201ENSMUST00000227310 336 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm5250-201ENSMUST00000059065 321 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Vps54Q5SPW0 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm45634-201ENSMUST00000209736 1990 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 AC133598.5-201ENSMUST00000224937 1517 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm12632-201ENSMUST00000121223 495 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm5835-201ENSMUST00000185806 1270 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm6610-201ENSMUST00000186324 358 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm43590-201ENSMUST00000195987 387 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm42932-201ENSMUST00000197280 744 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Gm45925-202ENSMUST00000219904 1136 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC9.23□□□□□ -0.93
Vps54Q5SPW0 CT009539.1-201ENSMUST00000226465 220 ntBASIC9.23□□□□□ -0.93
Vps54Q5SPW0 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms