Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Ap1b1-202ENSMUST00000101613 3735 ntTSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Kprp-201ENSMUST00000072363 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Plekha8-201ENSMUST00000101385 1838 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 4932438H23Rik-202ENSMUST00000114076 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm15169-202ENSMUST00000130794 2335 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Adcy4-202ENSMUST00000170223 3501 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Mgat4e-201ENSMUST00000052911 1360 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Map4k4-213ENSMUST00000193682 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm11558-201ENSMUST00000118454 459 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm12163-201ENSMUST00000121597 389 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm11871-201ENSMUST00000122429 1061 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC6.99□□□□□ -1.29
Col8a1Q00780 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm9697-201ENSMUST00000147052 997 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm43104-201ENSMUST00000197234 311 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm44585-201ENSMUST00000207150 607 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm7151-201ENSMUST00000211511 954 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 AC158631.2-201ENSMUST00000219999 478 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC6.99□□□□□ -1.29
Col8a1Q00780 CT025603.3-201ENSMUST00000224031 419 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 AC126028.1-201ENSMUST00000226218 2123 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col8a1Q00780 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Olfr1043-201ENSMUST00000099907 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 4430402I18Rik-208ENSMUST00000179171 2638 ntTSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Slc31a1-201ENSMUST00000084526 3718 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Olfr954-202ENSMUST00000214818 3299 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 C79130-201ENSMUST00000199610 4296 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm37334-201ENSMUST00000192325 2938 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 AC154828.1-201ENSMUST00000220696 2810 ntBASIC6.99□□□□□ -1.29
Col8a1Q00780 Aox3-205ENSMUST00000162011 1568 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Lpin3-202ENSMUST00000109455 3365 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col8a1Q00780 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col8a1Q00780 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col8a1Q00780 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col8a1Q00780 Eif2b3-202ENSMUST00000106447 3754 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col8a1Q00780 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Col8a1Q00780 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col8a1Q00780 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col8a1Q00780 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col8a1Q00780 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col8a1Q00780 Panx3-201ENSMUST00000011262 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col8a1Q00780 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Col8a1Q00780 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col8a1Q00780 Pkia-201ENSMUST00000028999 3617 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col8a1Q00780 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Col8a1Q00780 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms