Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rrp1P56183 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.68□□□□□ -1.02
Rrp1P56183 AC126028.1-201ENSMUST00000226218 2123 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rrp1P56183 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rrp1P56183 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Gm12838-201ENSMUST00000116278 325 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Gm13255-201ENSMUST00000117255 547 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Gm12851-201ENSMUST00000117920 421 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Gm4252-201ENSMUST00000174823 313 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Gm5973-201ENSMUST00000178542 496 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC8.68□□□□□ -1.02
Rrp1P56183 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC8.68□□□□□ -1.02
Rrp1P56183 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.68□□□□□ -1.02
Rrp1P56183 Gm32842-201ENSMUST00000212653 738 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.68□□□□□ -1.02
Rrp1P56183 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Gm4953-201ENSMUST00000077309 483 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Grik1-209ENSMUST00000227986 2942 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.68□□□□□ -1.02
Rrp1P56183 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rrp1P56183 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Rrp1P56183 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm8688-201ENSMUST00000118240 969 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm11997-201ENSMUST00000118697 313 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm12993-201ENSMUST00000119900 479 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm12634-201ENSMUST00000122157 992 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm24063-201ENSMUST00000157491 105 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm23497-201ENSMUST00000157738 130 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm22119-201ENSMUST00000175594 99 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm29041-201ENSMUST00000189199 380 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm37929-201ENSMUST00000195116 493 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm43247-201ENSMUST00000198638 481 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm16273-201ENSMUST00000202238 268 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.67□□□□□ -1.02
Rrp1P56183 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC8.67□□□□□ -1.02
Rrp1P56183 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm17875-201ENSMUST00000216005 941 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 AC131745.3-201ENSMUST00000223582 554 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
Rrp1P56183 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Olfr120-201ENSMUST00000077498 993 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rrp1P56183 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.67□□□□□ -1.02
Rrp1P56183 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rrp1P56183 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rrp1P56183 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.66□□□□□ -1.02
Rrp1P56183 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms