Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
NcanP55066 AC170188.1-201ENSMUST00000223710 1963 ntBASIC8.29□□□□□ -1.08
NcanP55066 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.29□□□□□ -1.08
NcanP55066 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Sez6l2-202ENSMUST00000106333 3595 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Cdhr2-201ENSMUST00000037145 4129 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.28□□□□□ -1.08
NcanP55066 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Zkscan1-204ENSMUST00000110963 4670 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 A430033K04Rik-202ENSMUST00000069862 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
NcanP55066 BC026762-201ENSMUST00000206555 2503 ntBASIC8.28□□□□□ -1.08
NcanP55066 AC130831.1-201ENSMUST00000224546 1474 ntBASIC8.28□□□□□ -1.08
NcanP55066 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
NcanP55066 Gm22284-201ENSMUST00000104132 132 ntBASIC8.28□□□□□ -1.08
NcanP55066 Gm7658-201ENSMUST00000119064 1124 ntBASIC8.28□□□□□ -1.08
NcanP55066 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Gm13828-201ENSMUST00000122278 363 ntBASIC8.28□□□□□ -1.08
NcanP55066 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC8.28□□□□□ -1.08
NcanP55066 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
NcanP55066 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Gm43711-201ENSMUST00000195994 373 ntBASIC8.28□□□□□ -1.08
NcanP55066 Gm43063-201ENSMUST00000198198 1081 ntBASIC8.28□□□□□ -1.08
NcanP55066 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
NcanP55066 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.28□□□□□ -1.08
NcanP55066 AC105407.1-201ENSMUST00000225684 614 ntBASIC8.28□□□□□ -1.08
NcanP55066 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.28□□□□□ -1.08
NcanP55066 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Gm45718-201ENSMUST00000207577 3794 ntBASIC8.28□□□□□ -1.08
NcanP55066 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
NcanP55066 Abca8a-201ENSMUST00000046223 5614 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
NcanP55066 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
NcanP55066 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NcanP55066 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
NcanP55066 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC8.28□□□□□ -1.08
NcanP55066 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NcanP55066 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
NcanP55066 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NcanP55066 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NcanP55066 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
NcanP55066 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NcanP55066 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.27□□□□□ -1.08
NcanP55066 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NcanP55066 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.27□□□□□ -1.08
NcanP55066 Ccdc171-201ENSMUST00000053414 4525 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NcanP55066 Gm25093-201ENSMUST00000103993 132 ntBASIC8.27□□□□□ -1.09
NcanP55066 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.27□□□□□ -1.09
NcanP55066 Gm13680-201ENSMUST00000119790 793 ntBASIC8.27□□□□□ -1.09
NcanP55066 Gm6142-201ENSMUST00000120290 325 ntBASIC8.27□□□□□ -1.09
NcanP55066 Gm12833-201ENSMUST00000136112 477 ntBASIC8.27□□□□□ -1.09
NcanP55066 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Gm24435-201ENSMUST00000157886 110 ntBASIC8.27□□□□□ -1.09
NcanP55066 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Gm6921-201ENSMUST00000161478 435 ntBASIC8.27□□□□□ -1.09
NcanP55066 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NcanP55066 Mir8105-201ENSMUST00000184718 89 ntBASIC8.27□□□□□ -1.09
NcanP55066 Mir7674-201ENSMUST00000184964 63 ntBASIC8.27□□□□□ -1.09
NcanP55066 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Gm43147-201ENSMUST00000196944 542 ntBASIC8.27□□□□□ -1.09
NcanP55066 Gm44227-201ENSMUST00000203576 241 ntBASIC8.27□□□□□ -1.09
NcanP55066 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 Gm45626-201ENSMUST00000210093 361 ntBASIC8.27□□□□□ -1.09
NcanP55066 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.27□□□□□ -1.09
NcanP55066 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NcanP55066 AC122034.1-201ENSMUST00000227641 595 ntBASIC8.27□□□□□ -1.09
NcanP55066 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms