Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Sat1-202ENSMUST00000112551 896 ntTSL 2 BASIC8.43□□□□□ -1.06
Sox1P53783 Mir669e-201ENSMUST00000117003 119 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Gm15754-201ENSMUST00000119191 478 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Gm12096-201ENSMUST00000121149 829 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Gm15188-201ENSMUST00000121264 704 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Vmn1r-ps113-201ENSMUST00000121318 1106 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Gm25782-201ENSMUST00000122526 289 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC8.43□□□□□ -1.06
Sox1P53783 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm26069-201ENSMUST00000157497 277 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Cfhr3-201ENSMUST00000170441 1022 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Slc35a5-205ENSMUST00000181177 865 ntTSL 3 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm8167-201ENSMUST00000183320 958 ntBASIC8.43□□□□□ -1.06
Sox1P53783 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Sox1P53783 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Gm18289-201ENSMUST00000203356 2989 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Gm18598-201ENSMUST00000207724 597 ntBASIC8.43□□□□□ -1.06
Sox1P53783 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm17875-201ENSMUST00000216005 941 ntBASIC8.43□□□□□ -1.06
Sox1P53783 CT025526.1-201ENSMUST00000217327 267 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm36208-201ENSMUST00000220013 429 ntBASIC8.43□□□□□ -1.06
Sox1P53783 CT030238.2-201ENSMUST00000227382 1278 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Zfp740-203ENSMUST00000119800 3882 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Adra2b-201ENSMUST00000071902 3936 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
Sox1P53783 Gm42765-202ENSMUST00000200017 3131 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Cald1-202ENSMUST00000079391 4127 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Sox1P53783 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Fmo5-201ENSMUST00000029729 2453 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 A530040E14Rik-201ENSMUST00000093501 1515 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Nell2-201ENSMUST00000075275 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Tmem167b-201ENSMUST00000090546 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Sox1P53783 Nobox-201ENSMUST00000031749 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Samd15-202ENSMUST00000182869 2031 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Nnt-202ENSMUST00000099149 3464 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Sez6l2-202ENSMUST00000106333 3595 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 AC117656.2-201ENSMUST00000224931 2215 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Dclre1c-202ENSMUST00000100463 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Kcns3-202ENSMUST00000164495 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Gm36949-201ENSMUST00000192487 2327 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Wdhd1-202ENSMUST00000111792 4174 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Sox1P53783 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Syt11-202ENSMUST00000107503 3575 ntTSL 2 BASIC8.42□□□□□ -1.06
Sox1P53783 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Gm26016-201ENSMUST00000104403 129 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sox1P53783 Gm12697-201ENSMUST00000118008 667 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Mup-ps14-201ENSMUST00000118437 532 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm12465-201ENSMUST00000118591 300 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm13651-201ENSMUST00000119086 1110 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm11483-201ENSMUST00000119839 247 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm9027-201ENSMUST00000165914 661 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC8.42□□□□□ -1.06
Sox1P53783 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Sox1P53783 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC8.42□□□□□ -1.06
Sox1P53783 Gm29355-201ENSMUST00000188178 697 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm28953-201ENSMUST00000188336 697 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm20788-201ENSMUST00000190538 697 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm18952-201ENSMUST00000194471 846 ntBASIC8.42□□□□□ -1.06
Sox1P53783 Gm37395-201ENSMUST00000194721 697 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms