Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC8.28□□□□□ -1.08
Usp4P35123 Gm6706-201ENSMUST00000145087 318 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC8.28□□□□□ -1.08
Usp4P35123 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Gm23413-201ENSMUST00000175521 125 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Gm20778-201ENSMUST00000178524 627 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.28□□□□□ -1.08
Usp4P35123 Gm27651-201ENSMUST00000183465 246 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC8.28□□□□□ -1.08
Usp4P35123 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp4P35123 Gm18717-201ENSMUST00000192744 1241 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 Gm31579-201ENSMUST00000203306 966 ntBASIC8.28□□□□□ -1.08
Usp4P35123 AC165260.3-201ENSMUST00000225101 665 ntBASIC8.28□□□□□ -1.08
Usp4P35123 AC102542.1-201ENSMUST00000225204 1138 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Gm9761-201ENSMUST00000075650 492 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Usp4P35123 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp4P35123 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.28□□□□□ -1.08
Usp4P35123 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp4P35123 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Usp4P35123 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp4P35123 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Usp4P35123 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Usp4P35123 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.27□□□□□ -1.08
Usp4P35123 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.27□□□□□ -1.08
Usp4P35123 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Usp4P35123 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Usp4P35123 Gm7910-201ENSMUST00000117896 835 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC8.27□□□□□ -1.09
Usp4P35123 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC8.27□□□□□ -1.09
Usp4P35123 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Usp4P35123 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm9499-201ENSMUST00000180888 964 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC8.27□□□□□ -1.09
Usp4P35123 Mir6415-201ENSMUST00000184064 100 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm8870-201ENSMUST00000188170 775 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Usp4P35123 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.27□□□□□ -1.09
Usp4P35123 Gm42698-201ENSMUST00000197790 762 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm43690-201ENSMUST00000201213 266 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm45698-201ENSMUST00000208537 1135 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Gm45900-201ENSMUST00000211879 409 ntBASIC8.27□□□□□ -1.09
Usp4P35123 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Usp4P35123 AC114585.2-203ENSMUST00000228400 339 ntBASIC8.27□□□□□ -1.09
Usp4P35123 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Usp4P35123 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Usp4P35123 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp4P35123 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Usp4P35123 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.26□□□□□ -1.09
Usp4P35123 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp4P35123 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Usp4P35123 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms