Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC101831.1-201ENSMUST00000228245 691 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm13178-201ENSMUST00000036876 1227 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm5513-201ENSMUST00000072982 1218 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Mir146b-201ENSMUST00000093619 109 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm37258-201ENSMUST00000191734 1627 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Lnpk-202ENSMUST00000102676 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 AC154729.1-201ENSMUST00000224481 1501 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Ciart-201ENSMUST00000036418 1398 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Sdc1P18828 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Sdc1P18828 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 n-R5s2-201ENSMUST00000101968 119 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 n-R5s194-201ENSMUST00000104719 119 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm14083-201ENSMUST00000117873 620 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm16210-201ENSMUST00000122161 610 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm12248-201ENSMUST00000137124 933 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm12305-201ENSMUST00000151817 407 ntTSL 2 BASIC6.19□□□□□ -1.42
Sdc1P18828 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 n-R5s112-201ENSMUST00000178208 119 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 n-R5s125-201ENSMUST00000179377 119 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 n-R5s120-201ENSMUST00000180000 119 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Mir8100-201ENSMUST00000184230 121 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Btg1-ps1-202ENSMUST00000184432 825 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm8004-201ENSMUST00000187782 617 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm37689-201ENSMUST00000193139 275 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm9240-201ENSMUST00000206527 742 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm18469-201ENSMUST00000208850 439 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm18972-201ENSMUST00000218873 630 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm21941-201ENSMUST00000221121 562 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 AC241621.1-201ENSMUST00000224499 430 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 AC138667.1-201ENSMUST00000225472 316 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm7936-201ENSMUST00000069529 375 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 n-R5s33-201ENSMUST00000093713 119 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.19□□□□□ -1.42
Sdc1P18828 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms