Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC9.02□□□□□ -0.97
Col1a1P11087 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col1a1P11087 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Col1a1P11087 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Col1a1P11087 AC159379.2-201ENSMUST00000220244 2482 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.01□□□□□ -0.97
Col1a1P11087 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm45354-201ENSMUST00000199820 2557 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Col1a1P11087 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col1a1P11087 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Col1a1P11087 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm13260-201ENSMUST00000117797 1264 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC9.01□□□□□ -0.97
Col1a1P11087 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm13622-201ENSMUST00000120658 433 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm25617-201ENSMUST00000179548 133 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col1a1P11087 Gm27218-201ENSMUST00000183745 392 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Gm8004-201ENSMUST00000187782 617 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Gm29008-201ENSMUST00000189387 298 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Gm25617-202ENSMUST00000198387 132 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Gm4870-201ENSMUST00000198525 1251 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 AC163621.1-201ENSMUST00000220695 379 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 CT030238.4-202ENSMUST00000226143 745 ntBASIC9.01□□□□□ -0.97
Col1a1P11087 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col1a1P11087 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col1a1P11087 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col1a1P11087 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col1a1P11087 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col1a1P11087 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC9□□□□□ -0.97
Col1a1P11087 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC9□□□□□ -0.97
Col1a1P11087 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col1a1P11087 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9□□□□□ -0.97
Col1a1P11087 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Col1a1P11087 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Gm12713-201ENSMUST00000118404 764 ntBASIC9□□□□□ -0.97
Col1a1P11087 Gm13545-201ENSMUST00000119044 482 ntBASIC9□□□□□ -0.97
Col1a1P11087 Gm14489-201ENSMUST00000120868 901 ntBASIC9□□□□□ -0.97
Col1a1P11087 Gm15538-201ENSMUST00000121410 313 ntBASIC9□□□□□ -0.97
Col1a1P11087 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC9□□□□□ -0.97
Col1a1P11087 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC9□□□□□ -0.97
Col1a1P11087 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC9□□□□□ -0.97
Col1a1P11087 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC9□□□□□ -0.97
Col1a1P11087 Gm3549-201ENSMUST00000203873 794 ntBASIC9□□□□□ -0.97
Col1a1P11087 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9□□□□□ -0.97
Col1a1P11087 Gm6581-201ENSMUST00000214545 260 ntBASIC9□□□□□ -0.97
Col1a1P11087 AC127224.1-201ENSMUST00000218094 453 ntBASIC9□□□□□ -0.97
Col1a1P11087 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC9□□□□□ -0.97
Col1a1P11087 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC9□□□□□ -0.97
Col1a1P11087 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC9□□□□□ -0.97
Col1a1P11087 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC9□□□□□ -0.97
Col1a1P11087 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms