Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm37447-201ENSMUST00000195625 2928 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm13732-201ENSMUST00000117753 535 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm42907-201ENSMUST00000199793 2148 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm11501-201ENSMUST00000118039 581 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm8607-201ENSMUST00000221864 431 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm42648-201ENSMUST00000200774 2505 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 AC131029.1-201ENSMUST00000226391 2929 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm13578-201ENSMUST00000120849 590 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm9285-201ENSMUST00000177691 697 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm6063-201ENSMUST00000206958 485 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm43339-201ENSMUST00000200032 1606 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm24272-201ENSMUST00000102329 98 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm13141-201ENSMUST00000117417 456 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Mir1983-201ENSMUST00000157523 132 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm28980-201ENSMUST00000187877 219 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 AC122034.1-201ENSMUST00000227641 595 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 CT009530.1-201ENSMUST00000227348 2927 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Pan2-201ENSMUST00000005825 4445 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cdh23Q99PF4 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Cdh23Q99PF4 Gm26416-201ENSMUST00000104280 134 ntBASIC7.54□□□□□ -1.2
Cdh23Q99PF4 Gm25498-201ENSMUST00000104424 129 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms