Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm26413-201ENSMUST00000196783 126 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm34144-201ENSMUST00000197039 259 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm44112-201ENSMUST00000204787 372 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm17875-201ENSMUST00000216005 941 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 AC124397.1-201ENSMUST00000224296 653 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm10108-201ENSMUST00000078246 319 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm4149-201ENSMUST00000099371 276 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm43519-201ENSMUST00000197239 1872 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm6729-201ENSMUST00000165173 1452 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm43411-201ENSMUST00000196235 1579 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm13081-201ENSMUST00000121527 5599 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 AC122887.1-201ENSMUST00000219265 2722 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Scrt1Q99M85 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm15054-201ENSMUST00000117393 281 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm13744-201ENSMUST00000118953 850 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm6275-201ENSMUST00000118971 1122 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm4835-201ENSMUST00000155839 972 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm7162-201ENSMUST00000161205 1024 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm3611-201ENSMUST00000173687 877 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Calm5-201ENSMUST00000183198 589 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm8167-201ENSMUST00000183320 958 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm28573-201ENSMUST00000187821 380 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm28145-201ENSMUST00000189742 380 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm28400-201ENSMUST00000191332 380 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm36932-201ENSMUST00000195226 929 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm43590-201ENSMUST00000195987 387 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm5050-201ENSMUST00000197164 775 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm43226-201ENSMUST00000202438 259 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm20136-201ENSMUST00000207501 891 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm5173-201ENSMUST00000219616 950 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm8153-201ENSMUST00000219844 952 ntBASIC6.9□□□□□ -1.3
Scrt1Q99M85 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scrt1Q99M85 Gm4863-201ENSMUST00000196907 1381 ntBASIC6.9□□□□□ -1.31
Scrt1Q99M85 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Scrt1Q99M85 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms