Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm6786-201ENSMUST00000203165 1915 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm18908-201ENSMUST00000207125 1483 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm43534-201ENSMUST00000197685 2853 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm12344-201ENSMUST00000117087 329 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm5390-201ENSMUST00000119069 1230 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm17235-201ENSMUST00000169128 964 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm2951-201ENSMUST00000169447 490 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm24083-201ENSMUST00000175174 120 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm45074-201ENSMUST00000209091 1240 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm45401-201ENSMUST00000209456 733 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm33096-201ENSMUST00000210189 493 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 AC154249.1-201ENSMUST00000226296 320 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm38386-201ENSMUST00000194293 3421 ntBASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nup88Q8CEC0 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm37403-201ENSMUST00000193775 3521 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm25167-201ENSMUST00000104188 120 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm24334-201ENSMUST00000104210 128 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm12773-201ENSMUST00000120134 587 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Calm5-201ENSMUST00000183198 589 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm6750-201ENSMUST00000189273 268 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm38430-201ENSMUST00000209888 1240 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 Gm18629-201ENSMUST00000222496 884 ntBASIC9.15□□□□□ -0.94
Nup88Q8CEC0 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC9.15□□□□□ -0.94
Nup88Q8CEC0 AC147096.1-201ENSMUST00000227648 352 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms