Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm42573-201ENSMUST00000202327 478 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 CT025685.1-201ENSMUST00000213716 150 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Usp47Q8BY87 AC154461.4-201ENSMUST00000224878 468 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Ephx2-202ENSMUST00000224698 1985 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm11282-201ENSMUST00000119018 1416 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm38315-201ENSMUST00000194286 2437 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm17184-201ENSMUST00000111864 462 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm6921-201ENSMUST00000161478 435 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm17973-201ENSMUST00000174509 520 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm28114-201ENSMUST00000187232 379 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 AC159205.1-201ENSMUST00000225513 1099 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm42546-201ENSMUST00000201584 2592 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Gm19031-201ENSMUST00000176280 1365 ntBASIC10.89□□□□□ -0.67
Usp47Q8BY87 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Usp47Q8BY87 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm11810-201ENSMUST00000118311 333 ntBASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm24782-201ENSMUST00000157641 132 ntBASIC10.88□□□□□ -0.67
Usp47Q8BY87 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm27401-201ENSMUST00000184052 173 ntBASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm19172-201ENSMUST00000203170 1246 ntBASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm44979-201ENSMUST00000206218 287 ntBASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Gm24613-201ENSMUST00000083266 130 ntBASIC10.88□□□□□ -0.67
Usp47Q8BY87 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usp47Q8BY87 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms