Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 CT030182.4-201ENSMUST00000223647 645 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Olfr683-201ENSMUST00000061284 960 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 Gm5446-201ENSMUST00000091762 784 ntBASIC10.05□□□□□ -0.8
Col16a1Q8BLX7 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 AC101875.1-201ENSMUST00000222666 2223 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm13183-201ENSMUST00000118615 789 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm11585-201ENSMUST00000120901 569 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm24781-201ENSMUST00000157636 117 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm16113-201ENSMUST00000159629 372 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm18808-201ENSMUST00000173316 462 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm5445-201ENSMUST00000180224 480 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm34583-203ENSMUST00000202586 454 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 AC155270.1-202ENSMUST00000221503 352 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 CT030238.3-201ENSMUST00000227352 875 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 AC168056.4-201ENSMUST00000223835 2567 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 AC154171.3-201ENSMUST00000224519 2505 ntBASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Col16a1Q8BLX7 Gm43196-201ENSMUST00000201762 2114 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm15484-201ENSMUST00000118871 828 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm6142-201ENSMUST00000120290 325 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm24011-201ENSMUST00000157732 268 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm18797-201ENSMUST00000190809 1174 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 AC192091.1-201ENSMUST00000218668 439 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 AC144783.1-201ENSMUST00000219103 960 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 AV026068-229ENSMUST00000225516 595 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm37069-201ENSMUST00000192742 4142 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Gm44835-201ENSMUST00000205544 3181 ntBASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Col16a1Q8BLX7 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Col16a1Q8BLX7 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.02□□□□□ -0.8
Col16a1Q8BLX7 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Col16a1Q8BLX7 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC10.02□□□□□ -0.8
Col16a1Q8BLX7 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC10.02□□□□□ -0.8
Col16a1Q8BLX7 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Col16a1Q8BLX7 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col16a1Q8BLX7 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 872.3 ms