Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc88cQ6VGS5 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc88cQ6VGS5 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc88cQ6VGS5 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc88cQ6VGS5 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc88cQ6VGS5 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc88cQ6VGS5 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Ccdc88cQ6VGS5 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Ephx2-202ENSMUST00000224698 1985 ntBASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm11443-201ENSMUST00000118790 479 ntBASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm9378-201ENSMUST00000120315 471 ntBASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm20797-201ENSMUST00000177894 383 ntBASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm18484-201ENSMUST00000204389 991 ntBASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm45446-201ENSMUST00000209348 216 ntBASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm19056-201ENSMUST00000218220 797 ntBASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm24613-201ENSMUST00000083266 130 ntBASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ccdc88cQ6VGS5 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm23079-201ENSMUST00000157847 117 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm22206-201ENSMUST00000158612 116 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm21430-201ENSMUST00000182998 998 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 CT009515.1-201ENSMUST00000228127 586 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm12258-201ENSMUST00000093768 2524 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm26429-201ENSMUST00000104829 110 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm8624-201ENSMUST00000118083 432 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm16523-201ENSMUST00000121253 592 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm2505-201ENSMUST00000200413 825 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Mir455-201ENSMUST00000093594 82 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc88cQ6VGS5 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 AC107453.4-201ENSMUST00000227068 1817 ntBASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Gm13463-201ENSMUST00000119020 233 ntBASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Gm5759-201ENSMUST00000119203 811 ntBASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Ccdc88cQ6VGS5 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms