Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm26063-201ENSMUST00000083378 107 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm17076-201ENSMUST00000165185 1401 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm16409-201ENSMUST00000100510 747 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm9143-201ENSMUST00000120745 745 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm8172-201ENSMUST00000120762 750 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm25320-201ENSMUST00000122551 324 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC8.57□□□□□ -1.04
Cntn3Q07409 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm18970-201ENSMUST00000186040 938 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm19086-201ENSMUST00000190772 665 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm9729-201ENSMUST00000196364 265 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm43013-201ENSMUST00000198216 247 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Olfr471-201ENSMUST00000210091 936 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm7839-201ENSMUST00000210755 673 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Cntn3Q07409 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC8.57□□□□□ -1.04
Cntn3Q07409 AC154851.2-201ENSMUST00000222172 644 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 AC131997.2-201ENSMUST00000227452 362 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 AC154738.3-201ENSMUST00000227953 409 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 AC122877.1-201ENSMUST00000228873 218 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
Cntn3Q07409 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cntn3Q07409 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC8.57□□□□□ -1.04
Cntn3Q07409 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cntn3Q07409 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Gpr55-201ENSMUST00000086975 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Gm39041-201ENSMUST00000205557 3902 ntBASIC8.56□□□□□ -1.04
Cntn3Q07409 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC8.56□□□□□ -1.04
Cntn3Q07409 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC8.56□□□□□ -1.04
Cntn3Q07409 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Cntn3Q07409 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.56□□□□□ -1.04
Cntn3Q07409 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cntn3Q07409 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms