Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
NcanP55066 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 AC161247.1-201ENSMUST00000217744 2295 ntBASIC8.3□□□□□ -1.08
NcanP55066 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NcanP55066 Gm14869-201ENSMUST00000119007 884 ntBASIC8.3□□□□□ -1.08
NcanP55066 Gm13221-201ENSMUST00000121712 430 ntBASIC8.3□□□□□ -1.08
NcanP55066 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Gm24680-201ENSMUST00000158759 126 ntBASIC8.3□□□□□ -1.08
NcanP55066 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.3□□□□□ -1.08
NcanP55066 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NcanP55066 Gm37177-201ENSMUST00000193768 417 ntBASIC8.3□□□□□ -1.08
NcanP55066 Gm45446-201ENSMUST00000209348 216 ntBASIC8.3□□□□□ -1.08
NcanP55066 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Olfr362-203ENSMUST00000215927 1210 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
NcanP55066 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC8.3□□□□□ -1.08
NcanP55066 AC124489.3-201ENSMUST00000224037 278 ntBASIC8.3□□□□□ -1.08
NcanP55066 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.3□□□□□ -1.08
NcanP55066 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC8.3□□□□□ -1.08
NcanP55066 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Gm12258-201ENSMUST00000093768 2524 ntBASIC8.3□□□□□ -1.08
NcanP55066 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
NcanP55066 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 AC122397.1-201ENSMUST00000228650 2819 ntBASIC8.3□□□□□ -1.08
NcanP55066 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NcanP55066 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
NcanP55066 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC8.29□□□□□ -1.08
NcanP55066 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Arhgap27-201ENSMUST00000041385 3512 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC8.29□□□□□ -1.08
NcanP55066 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
NcanP55066 Gm12002-202ENSMUST00000153794 1803 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.29□□□□□ -1.08
NcanP55066 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.29□□□□□ -1.08
NcanP55066 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
NcanP55066 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
NcanP55066 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
NcanP55066 Ldb2-201ENSMUST00000070748 2418 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC8.29□□□□□ -1.08
NcanP55066 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
NcanP55066 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
NcanP55066 Gm13750-201ENSMUST00000117621 465 ntBASIC8.29□□□□□ -1.08
NcanP55066 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.29□□□□□ -1.08
NcanP55066 Gm13466-201ENSMUST00000121515 999 ntBASIC8.29□□□□□ -1.08
NcanP55066 Rpl37rt-202ENSMUST00000124641 294 ntBASIC8.29□□□□□ -1.08
NcanP55066 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm4202-201ENSMUST00000169025 733 ntBASIC8.29□□□□□ -1.08
NcanP55066 Gm23139-201ENSMUST00000179454 132 ntBASIC8.29□□□□□ -1.08
NcanP55066 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm38079-201ENSMUST00000195603 154 ntBASIC8.29□□□□□ -1.08
NcanP55066 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NcanP55066 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.29□□□□□ -1.08
NcanP55066 Gm46317-201ENSMUST00000221103 393 ntBASIC8.29□□□□□ -1.08
NcanP55066 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.29□□□□□ -1.08
NcanP55066 Gm9848-201ENSMUST00000053398 259 ntBASIC8.29□□□□□ -1.08
NcanP55066 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.29□□□□□ -1.08
NcanP55066 Mir3068-201ENSMUST00000083004 136 ntBASIC8.29□□□□□ -1.08
NcanP55066 Gm24696-201ENSMUST00000083878 134 ntBASIC8.29□□□□□ -1.08
NcanP55066 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms