Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Wasf1-201ENSMUST00000019975 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Glb1l2-205ENSMUST00000162252 2209 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Lif-202ENSMUST00000066283 4026 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Phactr4-201ENSMUST00000084170 4483 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm37980-201ENSMUST00000194420 1910 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Sox1P53783 Zc3hav1-204ENSMUST00000143702 3364 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Aox3-205ENSMUST00000162011 1568 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Zcchc12-203ENSMUST00000115257 2051 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 AC126804.1-201ENSMUST00000216609 2079 ntBASIC8.44□□□□□ -1.06
Sox1P53783 4930435N07Rik-201ENSMUST00000208065 2127 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Limk2-203ENSMUST00000101642 3693 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm42979-201ENSMUST00000196287 2228 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Rasgrp1-205ENSMUST00000173541 2283 ntTSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Gm22022-201ENSMUST00000104355 127 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm25631-201ENSMUST00000104390 130 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm15362-201ENSMUST00000121459 388 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm11834-201ENSMUST00000122257 585 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.44□□□□□ -1.06
Sox1P53783 Gm6611-201ENSMUST00000163830 1272 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm25301-201ENSMUST00000175285 113 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Mir5625-201ENSMUST00000176598 80 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC8.44□□□□□ -1.06
Sox1P53783 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm27025-201ENSMUST00000182392 942 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm38214-201ENSMUST00000192581 988 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm38086-201ENSMUST00000193543 434 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm37993-201ENSMUST00000195301 988 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Gm19065-202ENSMUST00000203910 1165 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC8.44□□□□□ -1.06
Sox1P53783 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.44□□□□□ -1.06
Sox1P53783 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm18645-202ENSMUST00000212222 760 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm19572-201ENSMUST00000214326 338 ntBASIC8.44□□□□□ -1.06
Sox1P53783 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 AC207128.2-202ENSMUST00000224010 808 ntBASIC8.44□□□□□ -1.06
Sox1P53783 AC167977.2-201ENSMUST00000225676 682 ntBASIC8.44□□□□□ -1.06
Sox1P53783 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Sox1P53783 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm20900-201ENSMUST00000078729 472 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm25799-201ENSMUST00000082643 107 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Gm23102-201ENSMUST00000083724 116 ntBASIC8.44□□□□□ -1.06
Sox1P53783 AC154377.1-201ENSMUST00000226752 4979 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Ccdc162-201ENSMUST00000019955 1891 ntTSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Rnmt-202ENSMUST00000025427 1852 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.44□□□□□ -1.06
Sox1P53783 G3bp2-201ENSMUST00000113127 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Sox1P53783 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 AC117245.4-202ENSMUST00000214403 3816 ntTSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Sox1P53783 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm35048-201ENSMUST00000192105 2802 ntBASIC8.44□□□□□ -1.06
Sox1P53783 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sox1P53783 Gm44792-201ENSMUST00000207008 1628 ntBASIC8.43□□□□□ -1.06
Sox1P53783 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Ccdc80-201ENSMUST00000061050 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Cd200-202ENSMUST00000163230 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Sox1P53783 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Sox1P53783 Cnga2-201ENSMUST00000006020 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Arhgap27-201ENSMUST00000041385 3512 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Sox1P53783 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC8.43□□□□□ -1.06
Sox1P53783 Dpy19l4-201ENSMUST00000084892 6754 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms