Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm12751-201ENSMUST00000122336 381 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Gm17158-201ENSMUST00000168150 493 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC6.21□□□□□ -1.42
Sdc1P18828 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC6.21□□□□□ -1.42
Sdc1P18828 Mir7669-201ENSMUST00000183442 58 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Gm28922-201ENSMUST00000189785 308 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Gm42603-201ENSMUST00000199893 2146 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Gm45401-201ENSMUST00000209456 733 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC6.21□□□□□ -1.42
Sdc1P18828 AC124173.1-201ENSMUST00000223701 189 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 AC131100.1-201ENSMUST00000226328 470 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.21□□□□□ -1.42
Sdc1P18828 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sdc1P18828 Prp2-201ENSMUST00000076061 1074 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Sdc1P18828 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sdc1P18828 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Mir130b-201ENSMUST00000083638 82 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Sdc1P18828 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.21□□□□□ -1.42
Sdc1P18828 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Sdc1P18828 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sdc1P18828 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Sdc1P18828 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm8354-201ENSMUST00000189223 1373 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sdc1P18828 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm25092-201ENSMUST00000103996 129 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm23485-201ENSMUST00000104181 155 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm23127-201ENSMUST00000104261 130 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC6.2□□□□□ -1.42
Sdc1P18828 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm12098-201ENSMUST00000118277 508 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm12943-201ENSMUST00000119616 210 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm12870-201ENSMUST00000121383 1016 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC6.2□□□□□ -1.42
Sdc1P18828 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC6.2□□□□□ -1.42
Sdc1P18828 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC6.2□□□□□ -1.42
Sdc1P18828 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sdc1P18828 4930579G18Rik-201ENSMUST00000167763 968 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm17572-201ENSMUST00000171455 420 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm7456-201ENSMUST00000182862 1011 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Mir6953-201ENSMUST00000184745 68 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm2021-201ENSMUST00000190623 464 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 4930535E02Rik-201ENSMUST00000194463 655 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sdc1P18828 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm42698-201ENSMUST00000197790 762 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm43743-201ENSMUST00000197898 697 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 AC124457.1-201ENSMUST00000198845 120 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 AC153974.1-201ENSMUST00000219012 430 ntTSL 5 BASIC6.2□□□□□ -1.42
Sdc1P18828 AC153798.1-201ENSMUST00000219942 244 ntBASIC6.2□□□□□ -1.42
Sdc1P18828 AC103672.1-201ENSMUST00000227502 365 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms