Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.35□□□□□ -1.39
Cdx1P18111 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 AC168056.4-201ENSMUST00000223835 2567 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Cdx1P18111 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.34□□□□□ -1.39
Cdx1P18111 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm37326-201ENSMUST00000192828 3071 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm9742-202ENSMUST00000222219 1396 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm5393-201ENSMUST00000119106 272 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Gm12917-201ENSMUST00000119850 639 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm14532-201ENSMUST00000156115 279 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm3654-201ENSMUST00000173038 909 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Gm7678-201ENSMUST00000181879 943 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Gm8512-201ENSMUST00000215367 471 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 AC158802.1-201ENSMUST00000219693 361 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC6.34□□□□□ -1.39
Cdx1P18111 AC211878.7-201ENSMUST00000222851 661 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 AC123867.1-201ENSMUST00000224990 816 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 AC123692.2-201ENSMUST00000226272 342 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 8030411F24Rik-201ENSMUST00000028933 602 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Ackr1-201ENSMUST00000038227 1153 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Rpl36-ps3-201ENSMUST00000085720 315 ntBASIC6.34□□□□□ -1.39
Cdx1P18111 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cdx1P18111 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Mageb2-202ENSMUST00000201779 1551 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Ccdc28a-201ENSMUST00000052648 2255 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx1P18111 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.34□□□□□ -1.39
Cdx1P18111 Spx-204ENSMUST00000211094 1510 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdx1P18111 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Cdx1P18111 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Cdx1P18111 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.34□□□□□ -1.4
Cdx1P18111 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cdx1P18111 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cdx1P18111 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.34□□□□□ -1.4
Cdx1P18111 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.34□□□□□ -1.4
Cdx1P18111 Il1f5-202ENSMUST00000114490 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdx1P18111 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdx1P18111 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdx1P18111 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdx1P18111 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm25607-201ENSMUST00000104020 127 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm16418-201ENSMUST00000118577 171 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm15464-201ENSMUST00000118718 431 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm12275-201ENSMUST00000119805 307 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm13360-201ENSMUST00000121607 799 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm14830-201ENSMUST00000121899 700 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm5398-201ENSMUST00000121933 984 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm25455-201ENSMUST00000157946 325 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm8893-201ENSMUST00000172146 1242 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms