Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm5228-201ENSMUST00000117186 357 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm15709-201ENSMUST00000118354 213 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm13495-201ENSMUST00000121156 537 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC9.03□□□□□ -0.96
Col1a1P11087 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm27178-201ENSMUST00000184962 340 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm18593-201ENSMUST00000200754 1139 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm44258-201ENSMUST00000204925 301 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm4585-201ENSMUST00000207218 452 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm45478-201ENSMUST00000209472 211 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 CT010480.3-201ENSMUST00000224712 259 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Col1a1P11087 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm42572-201ENSMUST00000202292 3378 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Col1a1P11087 Gm43589-201ENSMUST00000199400 1523 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Gm10302-201ENSMUST00000174433 3535 ntBASIC9.03□□□□□ -0.96
Col1a1P11087 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC9.03□□□□□ -0.96
Col1a1P11087 AC156802.2-201ENSMUST00000225239 5740 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Gm11903-201ENSMUST00000118958 727 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Gm15007-201ENSMUST00000119982 710 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Gm12477-201ENSMUST00000121221 571 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.02□□□□□ -0.96
Col1a1P11087 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col1a1P11087 Gm16357-201ENSMUST00000144091 474 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col1a1P11087 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.02□□□□□ -0.96
Col1a1P11087 Gm8550-201ENSMUST00000161621 653 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Gm24155-201ENSMUST00000175259 110 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC9.02□□□□□ -0.96
Col1a1P11087 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col1a1P11087 Gm38200-201ENSMUST00000192083 2111 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Col1a1P11087 Gm8168-201ENSMUST00000209631 948 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC9.02□□□□□ -0.96
Col1a1P11087 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC9.02□□□□□ -0.96
Col1a1P11087 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 AC161275.1-201ENSMUST00000224668 208 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Gm9985-201ENSMUST00000044101 510 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Gm22504-201ENSMUST00000082963 139 ntBASIC9.02□□□□□ -0.96
Col1a1P11087 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC9.02□□□□□ -0.96
Col1a1P11087 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col1a1P11087 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Col1a1P11087 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC9.02□□□□□ -0.97
Col1a1P11087 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Gm42678-201ENSMUST00000197163 2221 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Col1a1P11087 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC9.02□□□□□ -0.97
Col1a1P11087 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Col1a1P11087 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Col1a1P11087 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Gm42897-201ENSMUST00000201486 2112 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Gm17076-201ENSMUST00000165185 1401 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Col1a1P11087 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Gm6743-201ENSMUST00000117345 1066 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Gm8421-201ENSMUST00000119439 305 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC9.02□□□□□ -0.97
Col1a1P11087 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC9.02□□□□□ -0.97
Col1a1P11087 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Col1a1P11087 Gm24157-201ENSMUST00000175265 111 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Gm23139-201ENSMUST00000179454 132 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Gm9114-201ENSMUST00000188558 997 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Gm38373-201ENSMUST00000192042 288 ntBASIC9.02□□□□□ -0.97
Col1a1P11087 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Col1a1P11087 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms