Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Col4a6B1AVK5 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col4a6B1AVK5 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col4a6B1AVK5 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col4a6B1AVK5 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col4a6B1AVK5 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.15
Col4a6B1AVK5 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Col4a6B1AVK5 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col4a6B1AVK5 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.9□□□□□ -1.15
Col4a6B1AVK5 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col4a6B1AVK5 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm14489-201ENSMUST00000120868 901 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm38226-201ENSMUST00000192207 521 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm34583-203ENSMUST00000202586 454 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm5446-201ENSMUST00000091762 784 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm22438-201ENSMUST00000104049 132 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm11858-201ENSMUST00000117935 838 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm15568-201ENSMUST00000118589 1213 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm15484-201ENSMUST00000118871 828 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm6142-201ENSMUST00000120290 325 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Mir3085-201ENSMUST00000175493 89 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Mir7046-201ENSMUST00000183435 66 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm29143-201ENSMUST00000189462 201 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm42782-201ENSMUST00000197286 522 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm44856-201ENSMUST00000206639 304 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm9267-201ENSMUST00000222831 404 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm24036-201ENSMUST00000082868 156 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col4a6B1AVK5 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.89□□□□□ -1.15
Col4a6B1AVK5 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm42700-201ENSMUST00000199071 2437 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm43311-201ENSMUST00000200016 2377 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm15081-201ENSMUST00000119794 844 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm3208-201ENSMUST00000168281 427 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm5261-201ENSMUST00000185860 713 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms