Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Scrt1Q99M85 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Scrt1Q99M85 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC6.93□□□□□ -1.3
Scrt1Q99M85 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Scrt1Q99M85 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Scrt1Q99M85 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Scrt1Q99M85 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Scrt1Q99M85 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Scrt1Q99M85 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Scrt1Q99M85 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.93□□□□□ -1.3
Scrt1Q99M85 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm25725-201ENSMUST00000104528 130 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm11969-201ENSMUST00000118848 356 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm11440-201ENSMUST00000121509 527 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm25690-201ENSMUST00000175439 77 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm21839-201ENSMUST00000179536 378 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm29759-201ENSMUST00000205860 327 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 AC132304.1-201ENSMUST00000218860 135 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 AC133183.2-201ENSMUST00000221543 280 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm43942-201ENSMUST00000204522 2859 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm37496-201ENSMUST00000191930 2509 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm11282-201ENSMUST00000119018 1416 ntBASIC6.92□□□□□ -1.3
Scrt1Q99M85 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Scrt1Q99M85 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 AC170188.1-201ENSMUST00000223710 1963 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm37956-201ENSMUST00000195208 2010 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Ighv5-6-201ENSMUST00000103446 353 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm12178-201ENSMUST00000120545 330 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm15160-201ENSMUST00000120553 907 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm16407-201ENSMUST00000122134 567 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm23077-201ENSMUST00000157854 116 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm27185-201ENSMUST00000184296 247 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm9142-201ENSMUST00000187161 955 ntBASIC6.91□□□□□ -1.3
Scrt1Q99M85 Gm29435-201ENSMUST00000191310 689 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms