Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm7162-201ENSMUST00000161205 1024 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 n-R5s115-201ENSMUST00000179019 119 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm8167-201ENSMUST00000183320 958 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm6123-201ENSMUST00000193658 1069 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 AC132587.1-201ENSMUST00000220562 166 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm18619-201ENSMUST00000222722 1147 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Olfr888-201ENSMUST00000075228 945 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 n-R5s193-201ENSMUST00000082864 109 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm37199-201ENSMUST00000193881 4065 ntBASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sf3a1Q8K4Z5 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm8995-202ENSMUST00000208417 3490 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm37326-201ENSMUST00000192828 3071 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 AC154482.1-201ENSMUST00000223248 2483 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm15928-201ENSMUST00000122455 280 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm17097-201ENSMUST00000166414 714 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 AC159246.1-201ENSMUST00000214478 249 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 AC165349.2-201ENSMUST00000219097 426 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 AC125117.2-201ENSMUST00000228344 1140 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 AC124715.1-201ENSMUST00000228480 754 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm37924-201ENSMUST00000195470 3647 ntBASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sf3a1Q8K4Z5 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Gm43158-201ENSMUST00000198484 1555 ntBASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Gm13929-201ENSMUST00000117553 1125 ntBASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Gm12967-201ENSMUST00000122147 289 ntBASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Gm6100-201ENSMUST00000180253 403 ntBASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sf3a1Q8K4Z5 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 166.3 ms