Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm12604-201ENSMUST00000118382 380 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Fau-ps2-201ENSMUST00000119333 371 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm11901-201ENSMUST00000120412 437 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm13649-201ENSMUST00000122325 606 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm5205-201ENSMUST00000182253 1003 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm28983-201ENSMUST00000186685 614 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm28150-201ENSMUST00000187305 614 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm8870-201ENSMUST00000188170 775 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm28377-201ENSMUST00000189695 720 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm37108-201ENSMUST00000194605 626 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm9761-201ENSMUST00000075650 492 ntBASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cchcr1Q8K2I2 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cchcr1Q8K2I2 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cchcr1Q8K2I2 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Cchcr1Q8K2I2 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cchcr1Q8K2I2 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cchcr1Q8K2I2 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Cchcr1Q8K2I2 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cchcr1Q8K2I2 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm37534-201ENSMUST00000194483 5222 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm12844-201ENSMUST00000119463 582 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm22424-201ENSMUST00000158527 87 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm24347-201ENSMUST00000158711 142 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm24899-201ENSMUST00000158892 73 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm18970-201ENSMUST00000186040 938 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm7369-201ENSMUST00000192738 936 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm43805-201ENSMUST00000198488 824 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 AC132384.10-201ENSMUST00000217862 1204 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm44117-201ENSMUST00000204442 1758 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Gm43534-201ENSMUST00000197685 2853 ntBASIC9.14□□□□□ -0.95
Cchcr1Q8K2I2 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm6819-201ENSMUST00000185325 1891 ntBASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm13458-201ENSMUST00000118239 367 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms