Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr888-201ENSMUST00000075228 945 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC9.19□□□□□ -0.94
Nup88Q8CEC0 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm45477-201ENSMUST00000200213 5498 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 AC158986.1-201ENSMUST00000228391 3455 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm13252-201ENSMUST00000119355 321 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm12517-201ENSMUST00000122082 425 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm29126-201ENSMUST00000188686 151 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm38315-201ENSMUST00000194286 2437 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm44165-201ENSMUST00000203093 1469 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm4536-201ENSMUST00000209157 542 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm6885-201ENSMUST00000217261 372 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm3742-201ENSMUST00000220907 1391 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 AC125019.1-201ENSMUST00000224809 908 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.18□□□□□ -0.94
Nup88Q8CEC0 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nup88Q8CEC0 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm5681-201ENSMUST00000189217 1533 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm13929-201ENSMUST00000117553 1125 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm15836-201ENSMUST00000119952 793 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm20430-201ENSMUST00000172474 207 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm10182-201ENSMUST00000178676 273 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm28341-201ENSMUST00000190883 472 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm19011-201ENSMUST00000221777 808 ntBASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nup88Q8CEC0 AC159635.1-201ENSMUST00000220905 2102 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms