Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm8502-201ENSMUST00000185708 901 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm21147-201ENSMUST00000186046 913 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm29195-201ENSMUST00000189038 379 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm9729-201ENSMUST00000196364 265 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm17979-201ENSMUST00000196646 611 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm42464-202ENSMUST00000198111 774 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm18243-201ENSMUST00000220756 887 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm9801-201ENSMUST00000054860 408 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm24143-201ENSMUST00000082633 145 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm37924-201ENSMUST00000195470 3647 ntBASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Vps53Q8CCB4 Gm43544-201ENSMUST00000196474 2472 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm24373-201ENSMUST00000104393 132 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm15836-201ENSMUST00000119952 793 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm8084-201ENSMUST00000120807 752 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm10157-201ENSMUST00000139408 343 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm26408-201ENSMUST00000157672 127 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm28341-201ENSMUST00000190883 472 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm38051-201ENSMUST00000193740 433 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm6522-201ENSMUST00000197160 1203 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm42861-201ENSMUST00000199596 634 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm3011-201ENSMUST00000215669 582 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm18378-201ENSMUST00000216245 628 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 AC144783.1-201ENSMUST00000219103 960 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm42656-201ENSMUST00000201506 2305 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.16□□□□□ -0.94
Vps53Q8CCB4 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm37077-201ENSMUST00000195723 3691 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm8836-201ENSMUST00000198196 1348 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Dalir-201ENSMUST00000188773 2170 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm15578-201ENSMUST00000117320 475 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm6292-201ENSMUST00000120712 1095 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm7418-201ENSMUST00000162120 801 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms