Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm42503-201ENSMUST00000199080 3706 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 AC154734.1-201ENSMUST00000219957 2141 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 4933436H12Rik-203ENSMUST00000207818 1466 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hmgb1P63158 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm15192-201ENSMUST00000121005 293 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm11760-201ENSMUST00000122355 796 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm23229-201ENSMUST00000157297 105 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Pea15b-202ENSMUST00000183185 555 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm28180-201ENSMUST00000189608 722 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm28341-201ENSMUST00000190883 472 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm42964-201ENSMUST00000202965 382 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm43928-201ENSMUST00000203737 409 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm8952-201ENSMUST00000206828 1102 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm8171-201ENSMUST00000217443 720 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm19169-201ENSMUST00000220109 1246 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 CT025552.1-201ENSMUST00000224561 521 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm10155-201ENSMUST00000084598 483 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm43322-201ENSMUST00000196232 1612 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb1P63158 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 AC130219.1-201ENSMUST00000228406 3433 ntBASIC8.86□□□□□ -0.99
Hmgb1P63158 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb1P63158 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm43330-201ENSMUST00000199706 2153 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm8818-201ENSMUST00000110797 1047 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm11649-201ENSMUST00000118214 375 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm14000-201ENSMUST00000118670 233 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm15028-201ENSMUST00000120295 370 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm15187-201ENSMUST00000122329 264 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm22484-201ENSMUST00000157992 306 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm22730-201ENSMUST00000158085 171 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm3275-201ENSMUST00000169145 487 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Calm5-201ENSMUST00000183198 589 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm27158-201ENSMUST00000183813 238 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms