Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC8.46□□□□□ -1.06
Sox1P53783 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC8.46□□□□□ -1.06
Sox1P53783 Gm20111-201ENSMUST00000184830 319 ntBASIC8.46□□□□□ -1.06
Sox1P53783 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Sox1P53783 Gm18301-201ENSMUST00000185261 888 ntBASIC8.46□□□□□ -1.06
Sox1P53783 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Gm6799-201ENSMUST00000186919 573 ntBASIC8.46□□□□□ -1.06
Sox1P53783 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.46□□□□□ -1.06
Sox1P53783 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.46□□□□□ -1.06
Sox1P53783 Gm43689-201ENSMUST00000195951 427 ntBASIC8.46□□□□□ -1.06
Sox1P53783 AC099760.1-201ENSMUST00000196300 153 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Gm7663-201ENSMUST00000201151 1240 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Gm44279-201ENSMUST00000205154 472 ntBASIC8.46□□□□□ -1.06
Sox1P53783 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC8.46□□□□□ -1.06
Sox1P53783 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Sox1P53783 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Sox1P53783 AC154849.1-201ENSMUST00000224873 960 ntBASIC8.46□□□□□ -1.06
Sox1P53783 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Sox1P53783 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Sox1P53783 Scel-202ENSMUST00000227322 2443 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Sox1P53783 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Sox1P53783 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Rars2-201ENSMUST00000029968 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 C2cd5-207ENSMUST00000203673 3332 ntTSL 5 BASIC8.46□□□□□ -1.06
Sox1P53783 Rgs12-206ENSMUST00000114284 3624 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Sox1P53783 Pde4b-202ENSMUST00000097949 2465 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Gm38066-201ENSMUST00000193223 1634 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.46□□□□□ -1.06
Sox1P53783 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Cd22-210ENSMUST00000189718 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Gm44154-201ENSMUST00000204559 2724 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Zfp551-202ENSMUST00000120220 2195 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 5031434C07Rik-201ENSMUST00000053559 2894 ntTSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Chrdl2-201ENSMUST00000032977 1520 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Bag3-201ENSMUST00000033136 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Gna14-201ENSMUST00000025602 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
Sox1P53783 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 n-R5s16-201ENSMUST00000104555 119 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Gm12142-201ENSMUST00000117114 485 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Gm15739-201ENSMUST00000118049 872 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Gm5135-201ENSMUST00000121100 573 ntBASIC8.45□□□□□ -1.06
Sox1P53783 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC8.45□□□□□ -1.06
Sox1P53783 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Gm28885-201ENSMUST00000185615 563 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Gm44395-201ENSMUST00000197056 153 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Gm44128-201ENSMUST00000204909 219 ntBASIC8.45□□□□□ -1.06
Sox1P53783 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Gm1943-201ENSMUST00000211890 174 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Gm19810-201ENSMUST00000218521 251 ntBASIC8.45□□□□□ -1.06
Sox1P53783 AC211878.6-201ENSMUST00000221896 358 ntBASIC8.45□□□□□ -1.06
Sox1P53783 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 AC147639.1-201ENSMUST00000224216 661 ntBASIC8.45□□□□□ -1.06
Sox1P53783 A1cf-203ENSMUST00000224400 1204 ntBASIC8.45□□□□□ -1.06
Sox1P53783 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Sox1P53783 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Sox1P53783 Olfr549-201ENSMUST00000098227 951 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Sox1P53783 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Sox1P53783 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Mmp27-202ENSMUST00000151853 1673 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Gm44562-201ENSMUST00000207194 1347 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Gm7680-201ENSMUST00000216198 1348 ntBASIC8.45□□□□□ -1.06
Sox1P53783 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Sox1P53783 Gm35934-201ENSMUST00000213002 2494 ntTSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Gm32365-202ENSMUST00000220053 1749 ntTSL 5 BASIC8.45□□□□□ -1.06
Sox1P53783 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Pilra-201ENSMUST00000058897 2578 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sox1P53783 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms