Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm10651-201ENSMUST00000118212 609 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm13160-201ENSMUST00000118441 627 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Pcna-ps1-201ENSMUST00000118453 738 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm6382-201ENSMUST00000118873 942 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm14016-201ENSMUST00000119095 486 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm11763-201ENSMUST00000119964 312 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm11604-201ENSMUST00000121487 742 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm11209-201ENSMUST00000130206 431 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdx1P18111 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm25767-201ENSMUST00000158572 124 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm23823-201ENSMUST00000158740 124 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm25190-201ENSMUST00000176664 95 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm28723-201ENSMUST00000188640 1001 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm43145-201ENSMUST00000198963 628 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Igkv9-119-201ENSMUST00000200307 353 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm43553-201ENSMUST00000200900 685 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm4754-201ENSMUST00000201337 809 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm19196-202ENSMUST00000210709 321 ntTSL 2 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm19196-203ENSMUST00000211164 363 ntTSL 2 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm17950-201ENSMUST00000214617 646 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdx1P18111 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Taf1b-203ENSMUST00000222710 521 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 AC132247.1-201ENSMUST00000225930 585 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cdx1P18111 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.36□□□□□ -1.39
Cdx1P18111 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.36□□□□□ -1.39
Cdx1P18111 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Gm40603-202ENSMUST00000219975 1642 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdx1P18111 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdx1P18111 4930488N15Rik-201ENSMUST00000212830 1561 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Cdx1P18111 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.35□□□□□ -1.39
Cdx1P18111 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Dnm3-203ENSMUST00000159763 1305 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm14609-201ENSMUST00000122176 902 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm10086-201ENSMUST00000136334 354 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm7076-201ENSMUST00000152421 456 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm25551-201ENSMUST00000158082 103 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm22949-201ENSMUST00000158562 105 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm22871-201ENSMUST00000177097 54 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm28361-201ENSMUST00000188825 474 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm2707-201ENSMUST00000188979 714 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm37155-201ENSMUST00000192152 406 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm45227-201ENSMUST00000205585 169 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm8767-201ENSMUST00000215786 1070 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Gm8834-201ENSMUST00000216459 565 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Ccl17-201ENSMUST00000034232 514 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Olfr90-201ENSMUST00000070808 1046 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdx1P18111 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Cdx1P18111 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdx1P18111 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdx1P18111 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdx1P18111 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.35□□□□□ -1.39
Cdx1P18111 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdx1P18111 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms