Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm11338-201ENSMUST00000120086 1160 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm12477-201ENSMUST00000121221 571 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm5656-201ENSMUST00000171020 1096 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm17786-201ENSMUST00000182000 427 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm38373-201ENSMUST00000192042 288 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm45478-201ENSMUST00000209472 211 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm4247-201ENSMUST00000211441 1042 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm22504-201ENSMUST00000082963 139 ntBASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col16a1Q8BLX7 Gm42546-201ENSMUST00000201584 2592 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm15007-201ENSMUST00000119982 710 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm14489-201ENSMUST00000120868 901 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm25640-201ENSMUST00000175378 125 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm37017-201ENSMUST00000195266 747 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm43772-201ENSMUST00000202052 379 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 AC127224.1-201ENSMUST00000218094 453 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 CT030238.4-202ENSMUST00000226143 745 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm37326-201ENSMUST00000192828 3071 ntBASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Col16a1Q8BLX7 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm42678-201ENSMUST00000197163 2221 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm13798-201ENSMUST00000118285 139 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm15913-201ENSMUST00000118492 331 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm24155-201ENSMUST00000175259 110 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Mir6244-201ENSMUST00000184156 117 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm19480-201ENSMUST00000185547 667 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm36928-201ENSMUST00000192466 694 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm37260-201ENSMUST00000193748 1251 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm37325-201ENSMUST00000194971 694 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 AC099760.1-201ENSMUST00000196300 153 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm42782-201ENSMUST00000197286 522 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm43560-201ENSMUST00000198100 773 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 AC116596.2-203ENSMUST00000227345 731 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 AC113031.6-202ENSMUST00000228468 1145 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Gm12661-201ENSMUST00000118780 3335 ntBASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col16a1Q8BLX7 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms