Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ccdc88cQ6VGS5 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm5228-201ENSMUST00000117186 357 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm11928-201ENSMUST00000119323 437 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Mir6340-201ENSMUST00000183857 119 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm28164-201ENSMUST00000190143 442 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm38226-201ENSMUST00000192207 521 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm44979-201ENSMUST00000206218 287 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm29143-201ENSMUST00000189462 201 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm43287-201ENSMUST00000197747 600 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm43558-201ENSMUST00000200155 210 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm45888-201ENSMUST00000212348 1229 ntBASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc88cQ6VGS5 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
Ccdc88cQ6VGS5 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.59□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm22660-201ENSMUST00000104193 130 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Mir669e-201ENSMUST00000117003 119 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm14248-201ENSMUST00000117790 544 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm11517-201ENSMUST00000119491 387 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm36961-201ENSMUST00000191980 132 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Gm18765-201ENSMUST00000203166 660 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Peg13-201ENSMUST00000202826 4725 ntBASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc88cQ6VGS5 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms