Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Tpm1P58771 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Tpm1P58771 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC8.59□□□□□ -1.03
Tpm1P58771 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm23533-201ENSMUST00000157540 245 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC8.59□□□□□ -1.03
Tpm1P58771 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm24083-201ENSMUST00000175174 120 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm18353-201ENSMUST00000185906 784 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Gm37185-201ENSMUST00000193852 410 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Gm37012-201ENSMUST00000194991 1078 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.59□□□□□ -1.03
Tpm1P58771 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC8.59□□□□□ -1.03
Tpm1P58771 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC8.59□□□□□ -1.03
Tpm1P58771 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 AC124465.1-201ENSMUST00000222349 746 ntTSL 3 BASIC8.59□□□□□ -1.03
Tpm1P58771 AC123058.1-201ENSMUST00000223748 437 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm1982-201ENSMUST00000188615 1887 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Tpm1P58771 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Tpm1P58771 Gm5975-201ENSMUST00000185256 1399 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.59□□□□□ -1.03
Tpm1P58771 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Tpm1P58771 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Tpm1P58771 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Tpm1P58771 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Tpm1P58771 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Tpm1P58771 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Gm26040-201ENSMUST00000158147 161 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Gm3275-201ENSMUST00000169145 487 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.58□□□□□ -1.04
Tpm1P58771 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC8.58□□□□□ -1.04
Tpm1P58771 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Tpm1P58771 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Gm42464-201ENSMUST00000196717 417 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Tpm1P58771 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC8.58□□□□□ -1.04
Tpm1P58771 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 Tssk4-203ENSMUST00000226497 1235 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.58□□□□□ -1.04
Tpm1P58771 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms