Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ankdd1b-201ENSMUST00000055607 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Gm9246-201ENSMUST00000117587 3490 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Rimbp2-202ENSMUST00000196085 3732 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Vps11-201ENSMUST00000034644 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.47□□□□□ -1.05
Sox1P53783 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm14925-201ENSMUST00000120611 438 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm11897-201ENSMUST00000121976 828 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Ctrcos-201ENSMUST00000128368 322 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm25180-201ENSMUST00000157746 115 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm22424-201ENSMUST00000158527 87 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm15795-201ENSMUST00000160969 553 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC8.47□□□□□ -1.05
Sox1P53783 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm18848-201ENSMUST00000182069 792 ntBASIC8.47□□□□□ -1.05
Sox1P53783 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Gm18183-201ENSMUST00000191024 615 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm36398-201ENSMUST00000192255 696 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm37934-201ENSMUST00000192902 402 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm30312-201ENSMUST00000194516 696 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm37987-201ENSMUST00000194999 825 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm42667-201ENSMUST00000196132 234 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm9729-201ENSMUST00000196364 265 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm42926-201ENSMUST00000200496 697 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm18193-201ENSMUST00000210017 772 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm45674-201ENSMUST00000210043 450 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Olfr471-201ENSMUST00000210091 936 ntBASIC8.47□□□□□ -1.05
Sox1P53783 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 AC154843.1-201ENSMUST00000226897 1138 ntBASIC8.47□□□□□ -1.05
Sox1P53783 CT010505.1-201ENSMUST00000227026 396 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Olfr1402-201ENSMUST00000060912 963 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Sox1P53783 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Sox1P53783 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Sox1P53783 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm23054-201ENSMUST00000082804 162 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Sox1P53783 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 AC153364.1-201ENSMUST00000220081 1510 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Gramd1b-203ENSMUST00000119373 3857 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Gm21026-201ENSMUST00000218628 1345 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm13590-201ENSMUST00000120183 1588 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Zfp185-203ENSMUST00000164800 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Sult5a1-201ENSMUST00000000755 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Apex2-204ENSMUST00000112721 1852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Cnot2-209ENSMUST00000167706 1621 ntTSL 5 BASIC8.47□□□□□ -1.05
Sox1P53783 Gm19409-201ENSMUST00000198244 2858 ntBASIC8.47□□□□□ -1.05
Sox1P53783 Zfp820-201ENSMUST00000084141 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sox1P53783 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 B020018J22Rik-201ENSMUST00000223085 3223 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 Cnr2-201ENSMUST00000068830 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 Trim39-201ENSMUST00000042717 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.46□□□□□ -1.05
Sox1P53783 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Sox1P53783 Ect2l-205ENSMUST00000209178 2586 ntTSL 5 BASIC8.46□□□□□ -1.05
Sox1P53783 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 Gm8159-202ENSMUST00000170546 1759 ntAPPRIS P5 TSL 5 BASIC8.46□□□□□ -1.05
Sox1P53783 Gm4491-201ENSMUST00000159455 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 AC133598.5-201ENSMUST00000224937 1517 ntBASIC8.46□□□□□ -1.05
Sox1P53783 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Sox1P53783 Gle1-201ENSMUST00000019859 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sox1P53783 Zfp408-201ENSMUST00000099714 3469 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Sox1P53783 Gm43684-201ENSMUST00000199279 6573 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sox1P53783 Rbm43-202ENSMUST00000102768 2106 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Sox1P53783 Gm23946-201ENSMUST00000104423 197 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC8.46□□□□□ -1.06
Sox1P53783 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC8.46□□□□□ -1.06
Sox1P53783 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC8.46□□□□□ -1.06
Sox1P53783 Gm12385-201ENSMUST00000117439 795 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Gm15238-201ENSMUST00000119938 1296 ntBASIC8.46□□□□□ -1.06
Sox1P53783 Gm15057-201ENSMUST00000121516 534 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms