Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28162-201ENSMUST00000190545 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29030-201ENSMUST00000190848 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28742-201ENSMUST00000191001 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28899-201ENSMUST00000191161 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29567-201ENSMUST00000191188 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28222-201ENSMUST00000191210 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28776-201ENSMUST00000191282 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29306-201ENSMUST00000191366 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29618-201ENSMUST00000191423 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28136-210ENSMUST00000191432 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29251-201ENSMUST00000191480 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm28658-201ENSMUST00000191532 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm32180-201ENSMUST00000192415 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm30598-201ENSMUST00000192620 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm37627-201ENSMUST00000194585 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm34274-201ENSMUST00000195825 615 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC10.14□□□□□ -0.79
Col18a1P39061 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 AC151730.1-201ENSMUST00000226106 448 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Mbtd1-205ENSMUST00000107853 5245 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Col18a1P39061 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm43465-201ENSMUST00000200367 2802 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm42519-201ENSMUST00000199282 3656 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Dsg3-201ENSMUST00000070892 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Pnpla1-202ENSMUST00000114737 4483 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Pnpla1-201ENSMUST00000056866 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm42633-201ENSMUST00000198853 2764 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm25311-201ENSMUST00000104136 132 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm9439-201ENSMUST00000119554 973 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm4886-201ENSMUST00000121874 1176 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm3760-201ENSMUST00000167475 804 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm7166-201ENSMUST00000199715 303 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm44896-201ENSMUST00000206190 772 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC10.14□□□□□ -0.79
Col18a1P39061 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Col18a1P39061 AC073562.1-201ENSMUST00000222117 401 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 AC159205.2-201ENSMUST00000223759 816 ntBASIC10.14□□□□□ -0.79
Col18a1P39061 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Col18a1P39061 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm12346-201ENSMUST00000121455 2255 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Col18a1P39061 D5Ertd579e-201ENSMUST00000031091 6677 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Col18a1P39061 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC10.13□□□□□ -0.79
Col18a1P39061 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm18451-201ENSMUST00000196759 1719 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm13126-201ENSMUST00000117079 3063 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12l1-201ENSMUST00000183090 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Gm8101-201ENSMUST00000192796 478 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Gm42752-201ENSMUST00000198394 1106 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms