Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col1a1P11087 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Col1a1P11087 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col1a1P11087 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm44090-201ENSMUST00000204669 1834 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm13229-201ENSMUST00000118238 340 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Gm13486-201ENSMUST00000119910 282 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm22533-201ENSMUST00000158821 274 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Gm20452-201ENSMUST00000174686 513 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm44279-201ENSMUST00000205154 472 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm10043-201ENSMUST00000210691 235 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 AC154382.1-201ENSMUST00000220958 1282 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm45657-201ENSMUST00000211318 1349 ntBASIC9.07□□□□□ -0.96
Col1a1P11087 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Col1a1P11087 Gm16433-201ENSMUST00000062429 1984 ntBASIC9.07□□□□□ -0.96
Col1a1P11087 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Gm38249-201ENSMUST00000192560 2321 ntBASIC9.07□□□□□ -0.96
Col1a1P11087 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Col1a1P11087 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.07□□□□□ -0.96
Col1a1P11087 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Col1a1P11087 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col1a1P11087 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Col1a1P11087 Gm8312-201ENSMUST00000119380 618 ntBASIC9.07□□□□□ -0.96
Col1a1P11087 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Gm22847-201ENSMUST00000157707 105 ntBASIC9.07□□□□□ -0.96
Col1a1P11087 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC9.07□□□□□ -0.96
Col1a1P11087 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC9.07□□□□□ -0.96
Col1a1P11087 CT009733.1-202ENSMUST00000224941 441 ntBASIC9.07□□□□□ -0.96
Col1a1P11087 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col1a1P11087 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col1a1P11087 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col1a1P11087 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col1a1P11087 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col1a1P11087 Gm37549-201ENSMUST00000194096 4065 ntBASIC9.07□□□□□ -0.96
Col1a1P11087 Gm45767-201ENSMUST00000212778 4561 ntBASIC9.06□□□□□ -0.96
Col1a1P11087 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Col1a1P11087 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Col1a1P11087 Gm23437-201ENSMUST00000104036 127 ntBASIC9.06□□□□□ -0.96
Col1a1P11087 Gm13423-201ENSMUST00000117205 888 ntBASIC9.06□□□□□ -0.96
Col1a1P11087 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC9.06□□□□□ -0.96
Col1a1P11087 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Gm29605-201ENSMUST00000190800 292 ntBASIC9.06□□□□□ -0.96
Col1a1P11087 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC9.06□□□□□ -0.96
Col1a1P11087 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC9.06□□□□□ -0.96
Col1a1P11087 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Col1a1P11087 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC9.06□□□□□ -0.96
Col1a1P11087 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.06□□□□□ -0.96
Col1a1P11087 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
Col1a1P11087 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col1a1P11087 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Col1a1P11087 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms