Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm12430-201ENSMUST00000121539 1322 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Scrt1Q99M85 Gm5681-201ENSMUST00000189217 1533 ntBASIC6.96□□□□□ -1.3
Scrt1Q99M85 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm2098-201ENSMUST00000189146 1763 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm22660-201ENSMUST00000104193 130 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm6044-201ENSMUST00000121819 499 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm24748-201ENSMUST00000157836 108 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm5327-201ENSMUST00000182864 1009 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm6799-201ENSMUST00000186919 573 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm7430-201ENSMUST00000193824 1144 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm42667-201ENSMUST00000196132 234 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm9729-201ENSMUST00000196364 265 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm19007-201ENSMUST00000217746 874 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm4898-201ENSMUST00000218519 832 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm43618-201ENSMUST00000197392 3451 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm28906-201ENSMUST00000191371 1779 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm3742-201ENSMUST00000220907 1391 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Gm10513-201ENSMUST00000194203 6468 ntBASIC6.95□□□□□ -1.3
Scrt1Q99M85 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Scrt1Q99M85 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.94□□□□□ -1.3
Scrt1Q99M85 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm24869-201ENSMUST00000104072 128 ntBASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm23946-201ENSMUST00000104423 197 ntBASIC6.94□□□□□ -1.3
Scrt1Q99M85 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm12460-201ENSMUST00000117147 357 ntBASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm11809-201ENSMUST00000120923 950 ntBASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm12642-201ENSMUST00000121098 876 ntBASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm16276-201ENSMUST00000131218 262 ntBASIC6.94□□□□□ -1.3
Scrt1Q99M85 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm26269-201ENSMUST00000180144 126 ntBASIC6.94□□□□□ -1.3
Scrt1Q99M85 Gm38051-201ENSMUST00000193740 433 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms