Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Gm44104-201ENSMUST00000204736 3777 ntBASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.91□□□□□ -0.82
Ccdc60Q8C4J0 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm12365-201ENSMUST00000117931 568 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm12024-201ENSMUST00000118819 1253 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm5406-201ENSMUST00000120054 766 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm11809-201ENSMUST00000120923 950 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm22670-201ENSMUST00000158724 143 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm8529-201ENSMUST00000183298 745 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm29273-201ENSMUST00000188880 262 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 AC154347.1-201ENSMUST00000221358 3105 ntBASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccdc60Q8C4J0 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Ccdc60Q8C4J0 AC156025.3-201ENSMUST00000225919 3095 ntBASIC9.9□□□□□ -0.83
Ccdc60Q8C4J0 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ccdc60Q8C4J0 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Ccdc60Q8C4J0 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Ccdc60Q8C4J0 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Ccdc60Q8C4J0 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Ccdc60Q8C4J0 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm22022-201ENSMUST00000104355 127 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm13495-201ENSMUST00000121156 537 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm16407-201ENSMUST00000122134 567 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Traj54-201ENSMUST00000165071 54 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm44902-201ENSMUST00000206177 805 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm9118-201ENSMUST00000219246 754 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 AC131586.4-201ENSMUST00000228424 668 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Gm5182-201ENSMUST00000217708 6092 ntBASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccdc60Q8C4J0 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms