Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Casc1-201ENSMUST00000060797 2572 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Cyp2c37-201ENSMUST00000049178 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Unc93a-201ENSMUST00000084966 2643 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm38043-201ENSMUST00000195501 5141 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm44257-201ENSMUST00000204469 1446 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm13731-201ENSMUST00000117332 196 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm13682-201ENSMUST00000117524 702 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm8802-201ENSMUST00000118633 740 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm11318-201ENSMUST00000118640 961 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm26980-201ENSMUST00000183321 395 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm27155-201ENSMUST00000183716 898 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm6321-201ENSMUST00000194460 1090 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm37989-201ENSMUST00000195202 803 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm43247-201ENSMUST00000198638 481 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC166358.1-201ENSMUST00000220677 105 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC153662.2-201ENSMUST00000221097 120 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC156037.2-201ENSMUST00000221284 112 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC166341.6-201ENSMUST00000221528 105 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 CT030242.1-201ENSMUST00000221945 125 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC124772.2-201ENSMUST00000222049 154 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC153663.1-201ENSMUST00000222165 120 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 CT030157.1-201ENSMUST00000222355 148 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC150661.2-201ENSMUST00000222418 105 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC127242.2-201ENSMUST00000223138 148 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC154323.1-201ENSMUST00000228329 1231 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm25799-201ENSMUST00000082643 107 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Mir350-201ENSMUST00000083639 99 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Mir486-201ENSMUST00000093576 128 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Cenpq-201ENSMUST00000087114 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Cnot2-209ENSMUST00000167706 1621 ntTSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 AC113304.1-201ENSMUST00000214014 1833 ntTSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 A430033K04Rik-202ENSMUST00000069862 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Gm43942-201ENSMUST00000204522 2859 ntBASIC8.24□□□□□ -1.09
Pcdh19Q80TF3 Clca2-201ENSMUST00000040465 3986 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm16536-201ENSMUST00000162209 1589 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Lipa-202ENSMUST00000178114 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm42897-201ENSMUST00000201486 2112 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm8049-201ENSMUST00000214336 1782 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Sub1-201ENSMUST00000022816 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms