Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC163041.1-201ENSMUST00000221984 133 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 CT009556.3-201ENSMUST00000226173 513 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 AC130673.1-201ENSMUST00000227992 435 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 AC154649.2-201ENSMUST00000228189 808 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm6054-201ENSMUST00000078052 378 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 AC162467.2-201ENSMUST00000219397 2571 ntBASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Vps54Q5SPW0 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm37200-201ENSMUST00000193689 2172 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Mir669e-201ENSMUST00000117003 119 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm11443-201ENSMUST00000118790 479 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm12024-201ENSMUST00000118819 1253 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm9378-201ENSMUST00000120315 471 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm12642-201ENSMUST00000121098 876 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm10012-202ENSMUST00000170379 372 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm20452-201ENSMUST00000174686 513 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Txn-ps1-201ENSMUST00000186385 309 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm38203-201ENSMUST00000191815 245 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm43515-201ENSMUST00000197930 2141 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm43560-201ENSMUST00000198100 773 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm42696-201ENSMUST00000199859 1142 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm9497-201ENSMUST00000199908 538 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 AC153961.1-201ENSMUST00000217760 385 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 AC107453.3-201ENSMUST00000228205 639 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 AC165260.6-202ENSMUST00000224959 1958 ntBASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Vps54Q5SPW0 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Gm22439-201ENSMUST00000104048 132 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Gm26429-201ENSMUST00000104829 110 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms