Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Tpm1P58771 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Tpm1P58771 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Tpm1P58771 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Tpm1P58771 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.62□□□□□ -1.03
Tpm1P58771 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.62□□□□□ -1.03
Tpm1P58771 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Tpm1P58771 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Tpm1P58771 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 4921515L22Rik-201ENSMUST00000218993 1537 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Gm12098-201ENSMUST00000118277 508 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Gm6798-201ENSMUST00000119961 360 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Gm13071-201ENSMUST00000122237 376 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC8.61□□□□□ -1.03
Tpm1P58771 Gm26357-201ENSMUST00000158218 115 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Tpm1P58771 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC8.61□□□□□ -1.03
Tpm1P58771 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC8.61□□□□□ -1.03
Tpm1P58771 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC8.61□□□□□ -1.03
Tpm1P58771 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Tpm1P58771 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.61□□□□□ -1.03
Tpm1P58771 Gm4120-201ENSMUST00000220456 578 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 AC207128.2-202ENSMUST00000224010 808 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 AC124736.1-201ENSMUST00000226382 419 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 AC132863.1-201ENSMUST00000228413 751 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Gm10123-201ENSMUST00000075723 490 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Gm10581-201ENSMUST00000097986 231 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Tpm1P58771 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Tpm1P58771 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Tpm1P58771 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Tpm1P58771 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
Tpm1P58771 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Tpm1P58771 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.61□□□□□ -1.03
Tpm1P58771 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC8.61□□□□□ -1.03
Tpm1P58771 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.61□□□□□ -1.03
Tpm1P58771 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Tpm1P58771 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Tpm1P58771 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm12378-201ENSMUST00000116171 1461 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Gm7701-201ENSMUST00000163185 1479 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm12170-201ENSMUST00000119281 300 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Gm11662-201ENSMUST00000121389 1193 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Tpm1P58771 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Tpm1P58771 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm2734-201ENSMUST00000208561 743 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Gm45295-201ENSMUST00000210393 1046 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Gm45527-201ENSMUST00000211052 774 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 AC167202.2-201ENSMUST00000220155 296 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm10054-201ENSMUST00000223362 431 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 AC161374.2-201ENSMUST00000223662 596 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm26132-201ENSMUST00000083166 148 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Snora57-201ENSMUST00000093658 148 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Tpm1P58771 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Tpm1P58771 Gm37373-201ENSMUST00000194005 2812 ntBASIC8.6□□□□□ -1.03
Tpm1P58771 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms