Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.1□□□□□ -0.95
Col1a1P11087 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col1a1P11087 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm18655-201ENSMUST00000214802 1090 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 AC154595.1-201ENSMUST00000225533 1059 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Col1a1P11087 Mir7b-201ENSMUST00000083557 111 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Gm20236-201ENSMUST00000193037 4540 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Gm37094-201ENSMUST00000193352 4540 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Col1a1P11087 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC9.1□□□□□ -0.95
Col1a1P11087 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm37960-201ENSMUST00000192402 1897 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Col1a1P11087 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm12187-201ENSMUST00000119584 1375 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col1a1P11087 AC160637.1-201ENSMUST00000214037 3887 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC9.1□□□□□ -0.95
Col1a1P11087 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Gm3203-201ENSMUST00000197670 2389 ntBASIC9.1□□□□□ -0.95
Col1a1P11087 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col1a1P11087 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 AC093043.2-201ENSMUST00000228616 2017 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Gm38380-201ENSMUST00000195718 2248 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Gm12024-201ENSMUST00000118819 1253 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC9.09□□□□□ -0.95
Col1a1P11087 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Gm3585-201ENSMUST00000173438 875 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Gm18501-201ENSMUST00000185363 664 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Gm28980-201ENSMUST00000187877 219 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC9.09□□□□□ -0.95
Col1a1P11087 Gm43287-201ENSMUST00000197747 600 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Gm5791-201ENSMUST00000220840 489 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Col1a1P11087 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC9.09□□□□□ -0.95
Col1a1P11087 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Col1a1P11087 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Gm38123-201ENSMUST00000194990 2779 ntBASIC9.09□□□□□ -0.95
Col1a1P11087 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
Col1a1P11087 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col1a1P11087 Gm12174-201ENSMUST00000119853 813 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col1a1P11087 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm23007-201ENSMUST00000158951 177 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Gm27034-201ENSMUST00000182552 940 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm42760-201ENSMUST00000199814 311 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col1a1P11087 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col1a1P11087 Gm10123-201ENSMUST00000075723 490 ntBASIC9.08□□□□□ -0.96
Col1a1P11087 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
Col1a1P11087 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.08□□□□□ -0.96
Col1a1P11087 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 158.9 ms