Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Hoxa4P06798 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hoxa4P06798 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Hoxa4P06798 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Hoxa4P06798 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Hoxa4P06798 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm28791-201ENSMUST00000185888 1779 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm25273-201ENSMUST00000104295 115 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm12024-201ENSMUST00000118819 1253 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm11907-201ENSMUST00000118918 1007 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm13680-201ENSMUST00000119790 793 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm11585-201ENSMUST00000120901 569 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 BC002163-201ENSMUST00000121906 319 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC7.77□□□□□ -1.17
Hoxa4P06798 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.77□□□□□ -1.17
Hoxa4P06798 Traj54-201ENSMUST00000165071 54 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm17097-201ENSMUST00000166414 714 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm2951-201ENSMUST00000169447 490 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm26505-201ENSMUST00000176208 166 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm15251-201ENSMUST00000177947 883 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm8304-201ENSMUST00000185744 584 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm43815-201ENSMUST00000197676 990 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm19254-201ENSMUST00000204828 294 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.77□□□□□ -1.17
Hoxa4P06798 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC7.77□□□□□ -1.17
Hoxa4P06798 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm5316-201ENSMUST00000050391 270 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Hoxa4P06798 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.77□□□□□ -1.17
Hoxa4P06798 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
Hoxa4P06798 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Hoxa4P06798 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hoxa4P06798 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm11443-201ENSMUST00000118790 479 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm9378-201ENSMUST00000120315 471 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm12124-201ENSMUST00000120504 679 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm23117-201ENSMUST00000158482 108 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm26413-202ENSMUST00000198972 127 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm27680-202ENSMUST00000199221 807 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm5307-201ENSMUST00000204772 760 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm30196-201ENSMUST00000208957 160 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm4120-201ENSMUST00000220456 578 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 AC137950.1-201ENSMUST00000228553 515 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm7493-201ENSMUST00000085919 626 ntBASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hoxa4P06798 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Hoxa4P06798 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms