Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Olfr1178-201ENSMUST00000075640 972 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Rpl31-201ENSMUST00000086535 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm7027-201ENSMUST00000086958 862 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm10335-201ENSMUST00000096020 468 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm10132-201ENSMUST00000099431 468 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm11756-201ENSMUST00000107310 1312 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Dtwd1-202ENSMUST00000170908 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm19683-201ENSMUST00000209748 1781 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 AC165260.6-202ENSMUST00000224959 1958 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm25000-201ENSMUST00000117016 114 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Defa-ps4-201ENSMUST00000118021 183 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Defa-ps17-201ENSMUST00000121849 171 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Defa-ps16-201ENSMUST00000121939 171 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm25780-201ENSMUST00000122528 253 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm2541-201ENSMUST00000161209 711 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm17139-201ENSMUST00000163802 571 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm27435-201ENSMUST00000183588 88 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm37185-201ENSMUST00000193852 410 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm18485-201ENSMUST00000203788 1114 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC6.32□□□□□ -1.4
Hmgb3O54879 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Hmgb3O54879 AC156561.1-201ENSMUST00000224774 233 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 AC159205.7-201ENSMUST00000225988 692 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Snora61-201ENSMUST00000083015 130 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 AC107757.2-201ENSMUST00000226370 1466 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm18901-201ENSMUST00000197840 1444 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm43869-201ENSMUST00000204742 1405 ntBASIC6.32□□□□□ -1.4
Hmgb3O54879 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmgb3O54879 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms