Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Syngap1F6SEU4 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC8.99□□□□□ -0.97
Syngap1F6SEU4 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.99□□□□□ -0.97
Syngap1F6SEU4 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm12106-201ENSMUST00000116006 1200 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm14772-201ENSMUST00000116562 514 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm13633-201ENSMUST00000120668 898 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm6750-201ENSMUST00000189273 268 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm18980-201ENSMUST00000199098 1079 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm45294-201ENSMUST00000210685 2102 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm3011-201ENSMUST00000215669 582 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm22581-201ENSMUST00000083735 136 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 AC153862.1-201ENSMUST00000215700 3349 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm42759-201ENSMUST00000195915 2439 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.98□□□□□ -0.97
Syngap1F6SEU4 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm17076-201ENSMUST00000165185 1401 ntBASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm22953-201ENSMUST00000116724 101 ntBASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm13673-201ENSMUST00000122056 531 ntBASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gm412-201ENSMUST00000193360 948 ntBASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.97□□□□□ -0.97
Syngap1F6SEU4 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.97□□□□□ -0.97
Syngap1F6SEU4 AC132304.1-201ENSMUST00000218860 135 ntBASIC8.97□□□□□ -0.97
Syngap1F6SEU4 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms